BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007H10SP1|AL425783
(800 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1264 1567 0.0
>3x_Contig1264
Length = 6524
Score = 1567 bits (788), Expect = 0.0
Identities = 795/800 (99%)
Strand = Plus / Minus
Query: 1 gatctggtgtaagtwcggccgtagatccaacggtatcaaggaaatcaaagcatttatcgg 60
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6233 gatctggtgtaagtacggccgtagatccaacggtatcaaggaaatcaaagcatttatcgg 6174
Query: 61 agaagacttcattgaatcaagaccaatgtggaaagaaatggtgcattgtttgcacagaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6173 agaagacttcattgaatcaagaccaatgtggaaagaaatggtgcattgtttgcacagaga 6114
Query: 121 gggttactcgaaacccatttccatcagtttccaaaaatctcgtcttgatgacttcactta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6113 gggttactcgaaacccatttccatcagtttccaaaaatctcgtcttgatgacttcactta 6054
Query: 181 tggtaaagagaaagatttgagttagatctcagagccaagcttggttatgaaacgtgccga 240
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 6053 tggtaaagagaaagatttgagtcagatctcagagccaagcttggttatgaaacgtgccga 5994
Query: 241 tttcaagatcttacaaataagtkatttacattttggcagacatatcgtctcagactccag 300
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 5993 tttcaagatcttacaaataagtgatttacattttggcagacatatcgtctcagactccag 5934
Query: 301 aaaagagaaaccagactcaatttttaggtacgattggcctaatgtccaatttattcattc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5933 aaaagagaaaccagactcaatttttaggtacgattggcctaatgtccaatttattcattc 5874
Query: 361 cgttattagaaacgaaagacccgatttagctgtyattacaggccatatctttaaagattt 420
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 5873 cgttattagaaacgaaagacccgatttagctgtcattacaggccatatctttaaagattt 5814
Query: 421 caacaaaaatttagactatgaaagtcaaatattaaagatggtatctcccattatcagcaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5813 caacaaaaatttagactatgaaagtcaaatattaaagatggtatctcccattatcagcaa 5754
Query: 481 tgggattccatttcttttcacttggggtgaaccccaagtaacaaccgagtttaaggttaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5753 tgggattccatttcttttcacttggggtgaaccccaagtaacaaccgagtttaaggttaa 5694
Query: 541 cattttaaacttcatcaaatctttaccattttgtttgaataaatttgacctcaaaaattc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5693 cattttaaacttcatcaaatctttaccattttgtttgaataaatttgacctcaaaaattc 5634
Query: 601 aacttatttgatgctcccactgctactaccagctaagacacctggcagtcaaaaacaaat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5633 aacttatttgatgctcccactgctactaccagctaagacacctggcagtcaaaaacaaat 5574
Query: 661 tggtactatatttgcattcgattcaaatgtwacagaatcgtacaacttcttagataaatt 720
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 5573 tggtactatatttgcattcgattcaaatgtaacagaatcgtacaacttcttagataaatt 5514
Query: 721 tccacgatcaccacaatcggtttacaatctagcatttcagcacttaccgctccatgaata 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5513 tccacgatcaccacaatcggtttacaatctagcatttcagcacttaccgctccatgaata 5454
Query: 781 tcgcccacagggttcatttg 800
||||||||||||||||||||
Sbjct: 5453 tcgcccacagggttcatttg 5434
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6924
Number of Sequences: 1807
Number of extensions: 6924
Number of successful extensions: 33
Number of sequences better than 1.0e-20: 1
length of query: 800
length of database: 10,358,551
effective HSP length: 16
effective length of query: 784
effective length of database: 10,329,639
effective search space: 8098436976
effective search space used: 8098436976
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)